Treangen Lab @ Rice
Treangen Lab @ Rice
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Ultra-high throughput mapping of genetic design space
Targeted metagenomic sequencing for detection of vertebrate viruses in wastewater for public health surveillance
SeqScreen-Nano: a computational platform for rapid, in-field characterization of previously unseen pathogens
Olivar: fully automated and variant aware primer design for multiplex tiled amplicon sequencing of pathogen genomes (preprint)
Minmers are a generalization of minimizers that enable unbiased local Jaccard estimation
MethPhaser: methylation-based haplotype phasing of human genomes
Improved understanding of biorisk for research involving microbial modification using annotated sequences of concern
Enabling accurate and early detection of recently emerged SARS-CoV-2 variants of concern in wastewater
Crykey: Comprehensive Identification of SARS-CoV-2 Cryptic Mutations in Wastewater
Bakdrive: identifying a minimum set of bacterial species driving interactions across multiple microbial communities
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