Treangen Lab @ Rice
Treangen Lab @ Rice
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Minmers are a generalization of minimizers that enable unbiased local Jaccard estimation
Bryce Kille
,
Erik Garrison
,
Todd J Treangen
,
Adam M Phillippy
Olivar: fully automated and variant aware primer design for multiplex tiled amplicon sequencing of pathogen genomes (preprint)
Michael X Wang
,
Esther G Lou
,
Dr. Nicolae Sapoval
,
Eddie Kim
,
Prashant Kalvapalle
,
Bryce Kille
,
Dr. R.A. Leo Elworth
,
Dr. Yunxi Liu
,
Dr. Yilei Fu
,
Lauren B Stadler
,
others
SeqScreen-Nano: a computational platform for rapid, in-field characterization of previously unseen pathogens
Dr. Advait Balaji
,
Dr. Yunxi Liu
,
Michael G Nute
,
Bingbing Hu
,
Anthony Kappell
,
Danielle S LeSassier
,
Gene D Godbold
,
Krista L Ternus
,
Todd J Treangen
Targeted metagenomic sequencing for detection of vertebrate viruses in wastewater for public health surveillance
Camille McCall
,
Ryan A Leo Elworth
,
Kristine M Wylie
,
Todd N Wylie
,
Katherine Dyson
,
Ryan Doughty
,
Todd Treangen
,
Loren Hopkins
,
Katherine B Ensor
,
Lauren B Stadler
The long game of tenure
Todd J Treangen
,
Moshe Y Vardi
Ultra-high throughput mapping of genetic design space
Ronan W O'Connell
,
Kshitij Rai
,
Trenton C Piepergerdes
,
Yiduo Wang
,
Kian D Samra
,
Jack A Wilson
,
Shujian Lin
,
Thomas H Zhang
,
Eduardo Ramos
,
Andrew Sun
,
others
Alterations to the gut microbiome after sport-related concussion in a collegiate football players cohort: A pilot study
Sirena Soriano
,
Kristen Curry
,
Saeed S Sadrameli
,
Dr. Qi Wang
,
Dr. Michael Nute
,
Elizabeth Reeves
,
Rasadul Kabir
,
Jonathan Wiese
,
Amber Criswell
,
Sarah Schodrof
,
others
Analysis of bronchoalveolar lavage fluid metatranscriptomes among patients with COVID-19 disease
Michael Jochum
,
Michael D Lee
,
Kristen Curry
,
Victoria Zaksas
,
Elizabeth Vitalis
,
Todd Treangen
,
Kjersti Aagaard
,
Krista L Ternus
Categorizing sequences of concern by function to better assess mechanisms of microbial pathogenesis
Gene D Godbold
,
Anthony D Kappell
,
Danielle S LeSassier
,
Todd J Treangen
,
Krista L Ternus
Comprehensive analysis and accurate quantification of unintended large gene modifications induced by CRISPR-Cas9 gene editing
So Hyun Park
,
Mingming Cao
,
Yidan Pan
,
Timothy H Davis
,
Lavanya Saxena
,
Harshavardhan Deshmukh
,
Dr. Yilei Fu
,
Todd Treangen
,
Vivien A Sheehan
,
Gang Bao
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