microbes

Squeegee is the first computational method for identifying potential microbial contaminants in the absence of environmental negative control samples.

Tracking SARS-CoV-2 variants within the Harvest Software Suite

Check out the SeqScreen preprint here

A novel approach to inferring microbial interactions across multiple microbiome samples

Background 16S rRNA based analysis is the established standard for elucidating microbial community composition. While short read 16S analyses are largely confined to genus-level resolution at best since only a portion of the gene is sequenced, full-length 16S sequences have the potential to provide species-level accuracy.

Large-scale microbial core genome alignment

a lab-of-origin detection software